Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889242.1_cds_XP_016443949.1_39061
CDS Infomation

[gene=LOC107769257] [db_xref=GeneID:107769257] [protein=protein NRT1/ PTR FAMILY 6.3-like] [protein_id=XP_016443949.1] [location=complement(join(89067..89940,90322..90331,90502..91057,92627..92666,92833..93010,93195..93312))] [gbkey=CDS]
Sequence

ATGGACCTTCCCCAGACACAACAAGATACAAAAGCTATTCCAGATGCCTGGGATTACAAA
GGGCGACCTGCTCTTAAATCACTCTCTGGTGGTTGGGCTAGTTCCGCCATGATTTTAGGA
GTTGAGGCAGTGGAGAGGCTAGTAACACTAGGCATTGCTGTAAACCTGGTGGTGTACTTG
ACTAAAACCATGCACTTGGGCAATGCTAACGCCGCAAACATTGTTACTAACTTTATGGGA
ACTTCCTATATCCTCACTTTGCTTGGTGGCTACATTGCTGACACTTTCATCGGAAGGTAT
CTTACCATTGGCATCTTCGCCACTGTTCAAGCTATAGGTGTCACAATTTTGACAATATCC
ACAATAATCCCAAGCCTGCGACCTCCAAAGTGTGAACTAGGAAGCTCAACATGCATCCCA
GCAAGCGGCGAACAACTCGCCGTCCTTTACACCGCCCTATACATGACGGCTCTAGGCACC
GGCGGCTTAAAATCCAGCGTCTCCGGTTTCGGTACCGACCAATTCGACGATTCCGACAAA
AAGGAAAGAGGCCAGATGATTAAATTCTTTAGCTGGTTCTTTTTCTTAATAAACGTAGGA
GCGCTAGCTGCAGTGACAGTACTGGTGTACATTCAGGATAAAGTGGGAAGGGAATGGGGT
TATGGTATATGCGCTTGTGCTATTATTGTTGGACTTGTCGTGTTCTTAACTGGGACAAAG
AAATATCGTTTCAAGAAACTTGTTGGGAGTCCATTGACTCAAATTGCTTCAGTGTTTGTT
GCTGCTTGGAGGAAAAGGCATCTGAAATTGCCATCTGATTCTTCTTTTCTTTTCAGTGTT
GATGATATTATTGGGGAAGATAACAAAAAGAATAAACAGCANATATATATATCAAAAAAC
TTTTTCTTGGACAAGGCAGCTATTAAAGAAGATAACAGTGAATTTTCCGGGACAACCATA
TTGAATAACTGGAATTTAGCAACTTTAACCGATGTTGAAGAAGTTAAATTGGTAATCAGA
ATGCTACCAACATGGGGCACGACCATTATGTTTTGGACTGTCTATGCTCAAATGACAACA
TTTTCTGTGTCACAAGCTACTACAATGAACCGTCACATTGGTAAATACTTTGAAATTCCA
GCTGCCTCGCTCACTGCTTTCTTTGTTGGAAGTATTCTTTTGATGATTATTTTCTATGAT
CGAATCATGGTTCCGATTTGTCGTCGATTCTTGAATAATCCACATGGTTTCACGCCGTTG
CAACGTATTGCTATAGGCCTAGTCAGTTCAATTTTTGCAATGATAGCTGCTGCTTTAACC
GAAGTTAAAAGATTGAAGGTTGCGAAATTACACGGATTGGCCAACGATCAGAATGCTATA
ATTCCTATGAGTGTGTTTTGGTTAGTCCCACAATTCTTGCTTGTTGGTGGAGGTGAAGCT
TTCACTTATATTGGGCAACTTGATTTTTTCTTAAGGGAATGTCCTAAAGGGATGAAGACT
ATGAGTACAGGGTTGTTTATAAGCACAATTTCATTAGGATTTTTCTTTAGTTCAATTTTG
GTCACAATTGTGGATAAGGTGACTGGAAAAACAAGGCCATGGTTAGCTGATAATCTGAAC
AAAGGGAAGCTCTATGATTTCTACTGGCTTTTGGCAATATTGAGTGTTTTGAATTTGATG
CTTTTCTTGTTTTGTTCAAGCCGATATGTGTACAAGGAGAAGAGGCTGGCTGAGGTAGGG
ATTGAAATGGAGGACTCGGACCCAGTTTGCCATTGA

Peptide Sequence

PEP ID

XP_016443949.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 6.3-like [Nicotiana tabacum]
Sequence

MDLPQTQQDTKAIPDAWDYKGRPALKSLSGGWASSAMILGVEAVERLVTLGIAVNLVVYL
TKTMHLGNANAANIVTNFMGTSYILTLLGGYIADTFIGRYLTIGIFATVQAIGVTILTIS
TIIPSLRPPKCELGSSTCIPASGEQLAVLYTALYMTALGTGGLKSSVSGFGTDQFDDSDK
KERGQMIKFFSWFFFLINVGALAAVTVLVYIQDKVGREWGYGICACAIIVGLVVFLTGTK
KYRFKKLVGSPLTQIASVFVAAWRKRHLKLPSDSSFLFSVDDIIGEDNKKNKQXIYISKN
FFLDKAAIKEDNSEFSGTTILNNWNLATLTDVEEVKLVIRMLPTWGTTIMFWTVYAQMTT
FSVSQATTMNRHIGKYFEIPAASLTAFFVGSILLMIIFYDRIMVPICRRFLNNPHGFTPL
QRIAIGLVSSIFAMIAAALTEVKRLKVAKLHGLANDQNAIIPMSVFWLVPQFLLVGGGEA
FTYIGQLDFFLRECPKGMKTMSTGLFISTISLGFFFSSILVTIVDKVTGKTRPWLADNLN
KGKLYDFYWLLAILSVLNLMLFLFCSSRYVYKEKRLAEVGIEMEDSDPVCH

Transcript Sequence

Gene sequence data has not been registered.